BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A07LP1|AL430154
(578 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 575 e-164
>3x_Contig1619
Length = 7770
Score = 575 bits (277), Expect = e-164
Identities = 304/323 (94%)
Strand = Plus / Minus
Query: 8 atatatatatatagaataatatgaatatatataatatccgcgattactcattttatgagt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atatatatatatagaataatatgaatatatataatatccgcgattactcattttatgagt 663
Query: 68 aatcgcggaattattcgtaaatatttatatatattatttcccgcggctcttcaccccacg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aatcgcggaattattcgtaaatatttatatatattatttcccgcggctcttcaccccacg 603
Query: 128 aatgttgggtgagagtccgcggggtaaatattgtaataataataataaktataaatacta 187
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 602 aatgttgggtgagagtccgcggggtaaatattgtaataataataataattataaatacta 543
Query: 188 ataattatatataaatatgggbbbgcggctyattagaagaataatccgcgggattatatt 247
|||||||||||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 542 ataattatatataaatataatcccgcggattattagaagaataatccgcgggattatatt 483
Query: 248 attgkaataataataattatatttdrkrrtrccaaccccggrcggctcgtccgggtaatt 307
|||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||
Sbjct: 482 attgtaataataataattatatttaataataccaaccccggacggctcgtccgggtaatt 423
Query: 308 tgatattaatatatrtatatmta 330
|||||||||||||| ||||| ||
Sbjct: 422 tgatattaatatatatatatata 400
Score = 206 bits (99), Expect = 6e-53
Identities = 125/137 (91%)
Strand = Plus / Minus
Query: 442 tatagwaagatatataatataaatatataattttwttattttatatgatktyacatttat 501
||||| |||||||||||||||||||||||||||| || | ||||||| | ||||||||
Sbjct: 287 tatagtaagatatataatataaatatataattttcttcggtcatatgatgtcacatttat 228
Query: 502 agkgtacatataaatattgggtcatactagtattaatatataatttatttttattatatt 561
|| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 227 agggtacatataaatattgggtcctactagtattaatatagaatttatttttattatatt 168
Query: 562 cataataaaatatawat 578
|||||||||||||| ||
Sbjct: 167 cataataaaatataaat 151
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.719 1.36
Gapped
Lambda K H
1.44 0.719 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9303
Number of Sequences: 1807
Number of extensions: 9303
Number of successful extensions: 598
Number of sequences better than 1.0e-20: 1
length of query: 578
length of database: 10,358,551
effective HSP length: 16
effective length of query: 562
effective length of database: 10,329,639
effective search space: 5805257118
effective search space used: 5805257118
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.1 bits)